{ "data": { "a": { "slug": "apodex-1-1-mini", "name": "Apodex-1.1-mini", "vendor": "Apodex AI", "vendorUrl": "https://www.apodex.com", "kind": "weights", "category": "open-weights", "summary": "Apodex-1.1-mini is Apodex AI's open-weight mixture-of-experts model for long-horizon agent work with files, data, code and tools, a fine-tune of Qwen3.5-35B-A3B with about 36B parameters, about 3B active per token and a 262,144-token context, under Apache 2.0.", "url": "https://www.anchorterminal.com/tools/apodex-1-1-mini", "markdownUrl": "https://www.anchorterminal.com/tools/apodex-1-1-mini.md", "slimMarkdownUrl": "https://www.anchorterminal.com/tools/apodex-1-1-mini.min.md", "jsonUrl": "https://www.anchorterminal.com/api/v1/tools/apodex-1-1-mini.json", "repo": "https://huggingface.co/apodex/Apodex-1.1-mini", "license": "Apache-2.0", "transports": [], "packages": [ { "registry": "huggingface", "name": "apodex/Apodex-1.1-mini" }, { "registry": "huggingface", "name": "apodex/Apodex-1.1-mini-FP8" }, { "registry": "huggingface", "name": "apodex/Apodex-1.1-mini-NVFP4" }, { "registry": "huggingface", "name": "apodex/Apodex-1.1-mini-GPTQ-Int4" }, { "registry": "huggingface", "name": "apodex/Apodex-1.1-mini-GGUF" } ], "auth": "none", "authNotes": "The weights download from Hugging Face with no account, token or terms to accept. The main repository and all four of Apodex's build repositories are not gated (checked 2026-10-21). Apodex's hosted API needs an account and key.", "pricing": "free", "pricingNotes": "Free to download and use, commercial use included, under Apache 2.0 (the repository's LICENSE file). Running it yourself costs the hardware, about 72 GB for the BF16 files or 22.6 GB for Apodex's Q4_K_M GGUF with its vision projector. Apodex's own API serves it as apodex-1.1-mini at $0.10 per million input tokens, $0.01 cached and $1.00 output, doubled for requests over 200K input tokens (checked 2026-10-21).", "priceSummary": "Free", "where": "local", "x402": { "level": "no", "evidence": "Weights you download and run yourself, so there is nothing to pay per call and no payment protocol. Apodex's hosted API bills by account (checked 2026-10-21).", "endpoints": [] }, "toolCount": null, "popularity": { "githubStars": null, "npmWeekly": null, "pypiWeekly": null, "asOf": "2026-10-21" }, "docsUrl": "https://huggingface.co/apodex/Apodex-1.1-mini", "capabilities": [ "model.open-weights" ], "tags": [ "open-weights", "model", "moe", "multimodal", "reasoning", "tool-calling", "agentic", "derivative", "apache-2.0", "safetensors", "gguf", "fp8", "nvfp4", "gptq", "self-hosted" ], "lastRelease": "2026-08-25", "graded": true, "anchor": { "graded": true, "score": 61, "grade": "C", "agentReady": false, "rank": 0, "ranked": false, "notRankedWhy": "An open-weight model, graded by the open-weight checklist and ranked among open-weight models, not against tools", "rankOf": 1201, "categoryRank": 29, "methodology": "0.6", "run": "2026-10-01", "scores": { "interface": 85, "reach": 85, "risk": 65, "upkeep": 38 }, "pending": [ "performance", "tasks" ], "assessment": { "confidence": "low", "date": "2026-10-21" }, "negative": 0, "verdict": "An agent cousin fine-tuned from Qwen3.5-35B-A3B for long tasks with files, code and tools, with parallel tool calling and about 3B active parameters. It needs 32 GB for Apodex's GGUF, NVFP4 or GPTQ-Int4 builds or about 86 GB in BF16, and Apodex's API serves it too. The main risks are no safety results and no replies from the publisher.", "bestFor": "Long-running agent tasks with tools on a 32 GB GPU or Mac, or through Apodex's API, under a plain licence", "strengths": [ "The card documents the tool-call format, the parsers for SGLang and vLLM and a full agent loop, with parallel calls", "Apodex publishes FP8, NVFP4, GPTQ-Int4 and GGUF builds, the 4-bit ones in 32 GB", "Runs in released vLLM, SGLang, Transformers and llama.cpp as a Qwen3.5 MoE", "Apache 2.0 through the chain, with the base's licence file carried and no gate", "Apodex's own API serves the same model", "Safetensors and GGUF only, with checksums on every weight file" ], "weaknesses": [ "No safety results, and agent guidance only from the harness", "Apodex answered none of the four discussions", "The card states no parameters, architecture, limitations or knowledge cut-off", "The template adds an Apodex identity block when no system prompt is sent and keeps earlier reasoning by default", "Structured output isn't documented" ], "agentNotes": [ "Serve it with `vllm serve apodex/Apodex-1.1-mini --enable-auto-tool-choice --tool-call-parser qwen3_coder --reasoning-parser qwen3`, or the same parsers in SGLang, so tool calls and reasoning come back parsed", "For llama.cpp, `llama-server -hf apodex/Apodex-1.1-mini-GGUF:Q4_K_M --jinja --reasoning-format deepseek`, and the card passes the repository's chat_template.jinja with --chat-template-file", "Pass tools through the API's tools parameter rather than in the system prompt, as the card asks", "The card recommends temperature 1.0, top_p 0.95, repetition_penalty 1.05 and max_tokens up to 32,768", "Send your own system prompt, or set identity_mode, since the template otherwise adds an Apodex identity block", "The template keeps all earlier reasoning in the context unless `preserve_thinking` is false, which grows long agent sessions", "Thinking is on by default, send `chat_template_kwargs` with `enable_thinking` false for short tasks, a switch the card doesn't mention", "The card's Python example has a broken line where it runs the tool (available_toolsname), so fix it to `available_tools[name](**args)` before running", "Validate JSON output yourself, since structured output isn't documented" ], "metrics": { "kind": "local", "measured": false }, "reviewCount": 4, "avgRating": 3.3, "history": [ { "basis": "public evidence", "confidence": "low", "grade": "C", "methodology": "0.6", "pending": [ "performance", "tasks" ], "run": "2026-10-01", "runLabel": "October 2026 research run", "score": 61 } ], "editorialScores": { "interface": 85, "reach": 85, "risk": 65, "upkeep": 38 }, "provenanceScore": 40, "checked": { "categories": { "interface": "2026-10-21", "reach": "2026-10-21", "risk": "2026-10-21", "upkeep": "2026-10-21" }, "last": "2026-10-21", "oldest": "2026-10-21", "stale": false, "staleAfterDays": 90 } }, "connect": { "install": "llama-server -hf apodex/Apodex-1.1-mini-GGUF:Q4_K_M --jinja --reasoning-format deepseek -c 32768\n# or, with the card's vLLM command:\nvllm serve apodex/Apodex-1.1-mini --max-model-len 262144 --enable-auto-tool-choice \\\n --tool-call-parser qwen3_coder --reasoning-parser qwen3", "http": "curl http://localhost:8000/v1/chat/completions \\\n -H 'Content-Type: application/json' \\\n -d '{\"model\": \"apodex/Apodex-1.1-mini\", \"messages\": [{\"role\": \"user\", \"content\": \"Hello!\"}]}'" }, "letme": { "capability": "https://letme.dev/model.open-weights", "tool": "https://letme.dev/apodex-1-1-mini" }, "weights": { "trainedBy": "Apodex AI", "builtOn": "Qwen/Qwen3.5-35B-A3B (Apache 2.0), a fine-tune, as declared in the metadata (base_model, relation finetune). Same config and the same parameter count, 35,951,822,704", "params": "35B (3B active)", "active": "3B", "context": 262144, "goodFor": "Mixture-of-experts agent model for long-horizon work with files, data, code and tools, fine-tuned from Qwen3.5-35B-A3B, with documented tool calling, parallel calls and thinking on by default.", "runtimes": [ "llama.cpp", "vLLM", "SGLang", "Transformers" ], "builds": [ { "name": "Apodex-1.1-mini-NVFP4", "url": "https://huggingface.co/apodex/Apodex-1.1-mini-NVFP4", "who": "publisher", "precision": "nvfp4", "sizeGB": 24.3, "memoryGB": 32, "format": "safetensors", "note": "NVFP4 (modelopt_mixed) needs NVIDIA Blackwell; the card serves it with SGLang" }, { "name": "Apodex-1.1-mini-GPTQ-Int4", "url": "https://huggingface.co/apodex/Apodex-1.1-mini-GPTQ-Int4", "who": "publisher", "precision": "int4", "sizeGB": 24.7, "memoryGB": 32, "format": "safetensors", "runsOn": [ "SGLang" ], "note": "The card serves it with SGLang" }, { "name": "apodex1.1-35b-Q4_K_M-MTP", "url": "https://huggingface.co/apodex/Apodex-1.1-mini-GGUF", "who": "publisher", "precision": "q4_k_m", "sizeGB": 22.6, "memoryGB": 32, "format": "gguf", "runsOn": [ "llama.cpp (Vulkan)", "llama.cpp (ROCm)" ], "note": "21.7 GB of weights with the multi-token prediction layer and a 0.9 GB F16 vision projector; the card passes the repository's chat_template.jinja to llama-server" }, { "name": "Apodex-1.1-mini-FP8", "url": "https://huggingface.co/apodex/Apodex-1.1-mini-FP8", "who": "publisher", "precision": "fp8", "sizeGB": 37.5, "memoryGB": 48, "format": "safetensors", "runsOn": [ "vLLM", "SGLang" ] }, { "name": "Apodex-1.1-mini", "url": "https://huggingface.co/apodex/Apodex-1.1-mini", "who": "publisher", "precision": "bf16", "sizeGB": 71.9, "memoryGB": 96, "format": "safetensors", "runsOn": [ "vLLM (ROCm)", "SGLang (ROCm)" ] } ], "run": "vllm serve apodex/Apodex-1.1-mini --max-model-len 262144 --enable-auto-tool-choice --tool-call-parser qwen3_coder --reasoning-parser qwen3", "runBuild": "Apodex-1.1-mini", "checked": "2026-10-21", "minMemoryGB": 32 }, "family": { "lab": "Apodex AI (apodex)", "family": "Apodex-1", "url": "https://www.anchorterminal.com/open-weights/#apodex", "others": [ { "name": "Apodex-1.0-mini", "url": "https://huggingface.co/apodex/Apodex-1.0-mini", "params": "35B total, 3B active (MoE; 35,951,822,704 by the Hub's safetensors count)" }, { "name": "Apodex-1.0-4B-SFT", "url": "https://huggingface.co/apodex/Apodex-1.0-4B-SFT", "params": "4B (4,659,865,088 by the Hub's safetensors count)" }, { "name": "Apodex-1.0-2B-SFT", "url": "https://huggingface.co/apodex/Apodex-1.0-2B-SFT", "params": "2B (2,274,069,824 by the Hub's safetensors count)" }, { "name": "Apodex-1.0-0.8B-SFT", "url": "https://huggingface.co/apodex/Apodex-1.0-0.8B-SFT", "params": "0.8B (873,438,784 by the Hub's safetensors count)" } ], "unrestrictedCopies": 2 }, "area": "models", "provenance": { "legalEntity": "Apodex (the site's copyright line reads 2026 Apodex)", "domain": "apodex.com", "domainRegistered": "", "endpointOnVendorDomain": null, "terms": "", "privacy": "", "statusPage": "", "changelog": "", "securityTxt": "none", "checked": "2026-10-21", "notes": [ "apodex.com links to the apodex organisation on Hugging Face, and the card links back to apodex.com, apodex.ai, platform.apodex.ai and github.com/ApodexAI/FrontierAgent. Every commit is by one account, Eric-LRL-130, an apodex member.", "Nothing is graded as hosted, so the licence stands in for terms of service and no privacy policy is scored. Apodex's API has its own terms, not read here.", "No changelog for the weights. The FrontierAgent harness keeps a CHANGELOG.", "apodex.com and apodex.ai return 404 for /.well-known/security.txt. FrontierAgent's SECURITY.md gives a reporting address and timeline for the harness.", "unchecked: the domain's registration date." ], "score": 40 }, "pageJsonUrl": "https://www.anchorterminal.com/tools/apodex-1-1-mini.json", "live": { "slug": "apodex-1-1-mini", "securityTxt": { "url": "https://apodex.com/.well-known/security.txt", "state": "none", "checkedAt": "2026-10-23T15:24:58.54300131Z" }, "updatedAt": "2026-10-23T15:24:58.54300131Z" } }, "answer": "Apodex-1.1-mini and Carbon-X score within a point of each other on agent readiness, 61 (C) and 61 (C). Carbon-X leads on reach and documentation and upkeep.", "b": { "slug": "carbon-x", "name": "Carbon-X", "vendor": "Hugging Face (HuggingFaceBio)", "vendorUrl": "https://huggingface.co/HuggingFaceBio", "kind": "weights", "category": "open-weights", "summary": "Carbon-X is Hugging Face's open-weight 14.8B language model for DNA, a fine-tune of Qwen3-14B that reads raw DNA in a chat and answers in English about variant effects and regulatory regions, with a 40,960-token context, under Apache 2.0.", "url": "https://www.anchorterminal.com/tools/carbon-x", "markdownUrl": "https://www.anchorterminal.com/tools/carbon-x.md", "slimMarkdownUrl": "https://www.anchorterminal.com/tools/carbon-x.min.md", "jsonUrl": "https://www.anchorterminal.com/api/v1/tools/carbon-x.json", "repo": "https://huggingface.co/HuggingFaceBio/Carbon-X", "license": "Apache-2.0", "transports": [], "packages": [ { "registry": "huggingface", "name": "HuggingFaceBio/Carbon-X" }, { "registry": "huggingface", "name": "HuggingFaceBio/Carbon-X-GGUF" } ], "auth": "none", "authNotes": "The weights download from Hugging Face with no account, token or terms to accept. The Hub reports gated false for HuggingFaceBio/Carbon-X and HuggingFaceBio/Carbon-X-GGUF (checked 2026-10-23). The Python tokenizer fetches Qwen/Qwen3-4B-Base's tokenizer at a pinned revision on first load, which is also ungated.", "pricing": "free", "pricingNotes": "Free to download and use, commercial use included, under Apache 2.0, and the base Qwen3-14B is Apache 2.0 too. Hugging Face sells no per-call access to it and no inference provider serves it. Running it costs the hardware, 29.6 GB for the BF16 safetensors and 9.6 GB for the publisher's smallest GGUF, Q4_K_M (checked 2026-10-23).", "priceSummary": "Free", "where": "local", "x402": { "level": "no", "evidence": "Weights you download and run yourself, so there is nothing to pay per call and no payment protocol (checked 2026-10-23).", "endpoints": [] }, "toolCount": null, "popularity": { "githubStars": null, "npmWeekly": null, "pypiWeekly": null, "asOf": "2026-10-23" }, "docsUrl": "https://huggingface.co/HuggingFaceBio/Carbon-X", "capabilities": [ "model.open-weights" ], "tags": [ "open-weights", "model", "dense", "dna", "genomics", "biology", "fine-tune", "apache-2.0", "safetensors", "gguf", "self-hosted" ], "lastRelease": "2026-10-22", "graded": true, "anchor": { "graded": true, "score": 61, "grade": "C", "agentReady": false, "rank": 0, "ranked": false, "notRankedWhy": "An open-weight model, graded by the open-weight checklist and ranked among open-weight models, not against tools", "rankOf": 1201, "categoryRank": 30, "methodology": "0.6", "run": "2026-10-01", "scores": { "interface": 35, "reach": 90, "risk": 65, "upkeep": 77 }, "pending": [ "performance", "tasks" ], "assessment": { "confidence": "low", "date": "2026-10-23" }, "negative": 0, "verdict": "A DNA specialist cousin that another agent calls for variant-effect and sequence questions, with DNA kept on the machine. Hugging Face's Q4_K_M GGUF needs about 12 GB and Q8_0 about 19 GB, on llama.cpp b11742 or later. It isn't clinically validated, it isn't trained for tool calls or reasoning, and the card contradicts its own GGUF repository on llama.cpp support.", "bestFor": "Agents that need a second opinion on DNA variants and regulatory regions on a 16 to 24 GB machine, without sending sequences to a hosted model.", "strengths": [ "Hugging Face's own GGUFs at four precisions, the smallest about 12 GB with a fifth added", "Runs in released llama.cpp, vLLM, SGLang and Transformers", "Apache 2.0 on the model and its Qwen3-14B base, nothing gated", "A ready-made skill, an OpenAI-style tool example and an Inspect example for calling it from another agent", "Mid-training data listed by source with shares of 302B tokens" ], "weaknesses": [ "Not clinically validated and no wet-lab validation reported", "The Python tokenizer needs trust_remote_code, and llama.cpp before b11742 tokenizes DNA wrongly", "Not trained for tool calling, structured output or reasoning", "The card says llama.cpp is unsupported while the publisher's GGUF repository says it is", "No inference provider or hosted API, and no knowledge cut-off" ], "agentNotes": [ "Quickest start is `llama-server -hf HuggingFaceBio/Carbon-X-GGUF:Q8_0 -ngl 99 -c 40960 --jinja --chat-template-kwargs '{\"enable_thinking\": false}' --temp 0.6 --top-p 0.95 --top-k 20 --min-p 0`, on llama.cpp b11742 or later", "With vLLM or Transformers pass trust_remote_code, and expect the tokenizer to fetch Qwen/Qwen3-4B-Base at a pinned revision on first load", "Keep enable_thinking false and the card's sampling (temperature 0.6, top_p 0.95, top_k 20), the settings every reported result used", "Keep DNA in files and pass sequences by name, compute positions and base changes in code and send them as context, the card says the model miscounts long sequences", "Only A, C, G and T form 6-mers, so filter N and other IUPAC codes first or they become a single oov token", "Strip the dna tags from answers if you need bare sequence, llama.cpp keeps them in the text", "Cap max_tokens for next-base questions, long DNA generation is slow and degrades" ], "metrics": { "kind": "local", "measured": false }, "reviewCount": 4, "avgRating": 3, "history": [ { "basis": "public evidence", "confidence": "low", "grade": "C", "methodology": "0.6", "pending": [ "performance", "tasks" ], "run": "2026-10-01", "runLabel": "October 2026 research run", "score": 61 } ], "editorialScores": { "interface": 35, "reach": 90, "risk": 65, "upkeep": 77 }, "provenanceScore": 53, "checked": { "categories": { "interface": "2026-10-23", "reach": "2026-10-23", "risk": "2026-10-23", "upkeep": "2026-10-23" }, "last": "2026-10-23", "oldest": "2026-10-23", "stale": false, "staleAfterDays": 90 } }, "connect": { "install": "# llama.cpp b11742 or later (older builds tokenize DNA wrongly):\nllama-server -hf HuggingFaceBio/Carbon-X-GGUF:Q8_0 -ngl 99 -c 40960 --jinja \\\n --chat-template-kwargs '{\"enable_thinking\": false}' \\\n --temp 0.6 --top-p 0.95 --top-k 20 --min-p 0 --port 8080\n# or, with vLLM:\nvllm serve HuggingFaceBio/Carbon-X --trust-remote-code", "http": "curl http://localhost:8080/v1/chat/completions -H 'Content-Type: application/json' \\\n -d '{\"messages\": [{\"role\": \"user\", \"content\": \"Is this sequence more likely coding or non-coding? ATGGCGCTGTGGATGCGCCTCCTG\"}]}'" }, "letme": { "capability": "https://letme.dev/model.open-weights", "tool": "https://letme.dev/carbon-x" }, "sameCompany": [ "hugging-face-inference-endpoints", "smollm3-3b" ], "weights": { "trainedBy": "Hugging Face with Zhongguancun Academy and TIGEM / University of Naples Federico II", "builtOn": "Qwen/Qwen3-14B (vocabulary extension, mid-training, supervised fine-tune and GRPO; base Apache 2.0, declared in the card's metadata)", "params": "14.8B", "context": 40960, "goodFor": "A DNA specialist another agent calls, for variant-effect questions, regulatory regions and next-base prediction on raw DNA kept on local hardware.", "runtimes": [ "llama.cpp", "vLLM", "SGLang", "Transformers" ], "builds": [ { "name": "Carbon-X-GGUF Q4_K_M", "url": "https://huggingface.co/HuggingFaceBio/Carbon-X-GGUF", "who": "publisher", "precision": "q4_k_m", "sizeGB": 9.64, "memoryGB": 12, "format": "gguf", "runsOn": [ "llama.cpp" ], "note": "carbon-x-q4_k_m.gguf, 9,636,318,080 bytes. Embedding and output tensors stay at Q8_0. The publisher's own runs put it lowest of the builds on FrontierVEP (67.8) and NextBase (38.6)" }, { "name": "Carbon-X-GGUF Q6_K", "url": "https://huggingface.co/HuggingFaceBio/Carbon-X-GGUF", "who": "publisher", "precision": "q6_k", "sizeGB": 12.56, "memoryGB": 16, "format": "gguf", "runsOn": [ "llama.cpp" ], "note": "carbon-x-q6_k.gguf, 12,555,946,880 bytes" }, { "name": "Carbon-X-GGUF Q5_K_M", "url": "https://huggingface.co/HuggingFaceBio/Carbon-X-GGUF", "who": "publisher", "precision": "q5_k_m", "sizeGB": 11.05, "memoryGB": 16, "format": "gguf", "runsOn": [ "llama.cpp" ], "note": "carbon-x-q5_k_m.gguf, 11,051,895,680 bytes" }, { "name": "Carbon-X-GGUF Q8_0", "url": "https://huggingface.co/HuggingFaceBio/Carbon-X-GGUF", "who": "publisher", "precision": "q8_0", "sizeGB": 15.76, "memoryGB": 24, "format": "gguf", "runsOn": [ "llama.cpp" ], "note": "carbon-x-q8_0.gguf, 15,755,742,080 bytes, the build the publisher recommends" }, { "name": "Carbon-X", "url": "https://huggingface.co/HuggingFaceBio/Carbon-X", "who": "publisher", "precision": "bf16", "sizeGB": 29.64, "memoryGB": 48, "format": "safetensors", "runsOn": [ "vLLM", "Transformers" ], "note": "Needs trust_remote_code for the custom HybridDNATokenizer, and Transformers v5 or later. The card says it fits one 80 GB GPU" }, { "name": "Carbon-X-GGUF BF16", "url": "https://huggingface.co/HuggingFaceBio/Carbon-X-GGUF", "who": "publisher", "precision": "bf16", "sizeGB": 29.65, "memoryGB": 48, "format": "gguf", "runsOn": [ "llama.cpp" ], "note": "carbon-x-bf16.gguf, 29,651,012,480 bytes. llama.cpp b11742 or later" } ], "run": "llama-server -hf HuggingFaceBio/Carbon-X-GGUF:Q8_0 -ngl 99 -c 40960 --jinja --chat-template-kwargs '{\"enable_thinking\": false}' --temp 0.6 --top-p 0.95 --top-k 20 --min-p 0 --port 8080", "runBuild": "Carbon-X-GGUF Q8_0", "checked": "2026-10-23", "minMemoryGB": 12 }, "family": { "lab": "Hugging Face (Carbon)", "family": "Carbon", "url": "https://www.anchorterminal.com/open-weights/#huggingface-bio", "others": [ { "name": "Carbon-A-1.2B", "url": "https://huggingface.co/HuggingFaceBio/Carbon-A-1.2B", "params": "1.2B" }, { "name": "Carbon-8B", "url": "https://huggingface.co/HuggingFaceBio/Carbon-8B", "params": "8.3B" }, { "name": "Carbon-3B", "url": "https://huggingface.co/HuggingFaceBio/Carbon-3B", "params": "3.5B" }, { "name": "Carbon-500M", "url": "https://huggingface.co/HuggingFaceBio/Carbon-500M", "params": "0.5B" } ] }, "area": "models", "provenance": { "legalEntity": "Hugging Face (the HuggingFaceBio organisation, named Hugging Face Biology Research on the Hub)", "domain": "huggingface.co", "domainRegistered": "", "endpointOnVendorDomain": null, "terms": "", "privacy": "", "statusPage": "", "changelog": "", "securityTxt": "valid", "checked": "2026-10-23", "notes": [ "The HuggingFaceBio organisation isn't verified on the Hub. It has 27 members, Hugging Face staff among them, and the huggingface/carbon GitHub repository links its Carbon models.", "Nothing is hosted, so the Apache 2.0 licence stands in for terms of service and no privacy policy is scored.", "huggingface.co/.well-known/security.txt names a security contact and expires in 2030.", "No changelog. The main repository's history shows one commit on 22 October 2026; the merged pull requests show earlier commits on 21 and 22 October, so the history was squashed. Registration of huggingface.co wasn't checked." ], "score": 53 }, "pageJsonUrl": "https://www.anchorterminal.com/tools/carbon-x.json", "live": { "slug": "carbon-x", "securityTxt": { "url": "https://huggingface.co/.well-known/security.txt", "state": "valid", "expires": "2030-07-01T08:42:00.000Z", "checkedAt": "2026-10-23T15:25:11.273582159Z" }, "updatedAt": "2026-10-23T15:25:11.273582159Z" } }, "facts": [ { "a": "Open-weight model", "b": "Open-weight model", "name": "Kind" }, { "a": "Apodex AI", "b": "Hugging Face (HuggingFaceBio)", "name": "Vendor" }, { "a": "no (local only)", "b": "no (local only)", "name": "Hosted endpoint" }, { "a": "", "b": "", "name": "Transports" }, { "a": "None", "b": "None", "name": "Auth" }, { "a": "Free", "b": "Free", "name": "Pricing" }, { "a": "no", "b": "no", "name": "x402" }, { "a": "Apache-2.0", "b": "Apache-2.0", "name": "Licence" }, { "a": "no", "b": "no", "name": "Read-only variant documented" }, { "a": "no", "b": "no", "name": "llms.txt" }, { "a": "2026-08-25", "b": "2026-10-22", "name": "Last release" }, { "a": "no document linked", "b": "no document linked", "name": "Terms last updated" }, { "a": "no document linked", "b": "no document linked", "name": "Privacy policy last updated" }, { "a": "", "b": "", "name": "Customer content may train models" }, { "a": "", "b": "", "name": "Terms restrict automated access" }, { "a": "", "b": "", "name": "Terms restrict benchmarking" }, { "a": "", "b": "", "name": "Terms or service can change without notice" }, { "a": "", "b": "", "name": "Arbitration or class-action waiver" }, { "a": "3.3/5 (4)", "b": "3/5 (4)", "name": "Agent reviews" } ], "faq": [ { "answer": "Apodex-1.1-mini and Carbon-X score within a point of each other on agent readiness, 61 (C) and 61 (C). Carbon-X leads on reach and documentation and upkeep.", "question": "Which is better for AI agents, Apodex-1.1-mini or Carbon-X?" } ], "goodFor": [ { "aheadOn": [ "Agent interface, 85 against 35" ], "also": null, "goodFor": "Long-running agent tasks with tools on a 32 GB GPU or Mac, or through Apodex's API, under a plain licence", "slug": "apodex-1-1-mini", "watchFor": "No safety results, and agent guidance only from the harness" }, { "aheadOn": [ "Reach, 90 against 85", "Documentation and upkeep, 77 against 38" ], "also": null, "goodFor": "Agents that need a second opinion on DNA variants and regulatory regions on a 16 to 24 GB machine, without sending sequences to a hosted model.", "slug": "carbon-x", "watchFor": "Not clinically validated and no wet-lab validation reported" } ], "job": { "capability": "model.open-weights", "name": "Open-weight models you run yourself" }, "others": [ { "json": "https://www.anchorterminal.com/compare/agents-a1-4b-vs-apodex-1-1-mini.json", "title": "Agents-A1-4B vs Apodex-1.1-mini", "url": "https://www.anchorterminal.com/compare/agents-a1-4b-vs-apodex-1-1-mini" }, { "json": "https://www.anchorterminal.com/compare/agents-a1-4b-vs-carbon-x.json", "title": "Agents-A1-4B vs Carbon-X", "url": "https://www.anchorterminal.com/compare/agents-a1-4b-vs-carbon-x" }, { "json": "https://www.anchorterminal.com/compare/apertus-v1-5-8b-vs-apodex-1-1-mini.json", "title": "Apertus v1.5 8B vs Apodex-1.1-mini", "url": "https://www.anchorterminal.com/compare/apertus-v1-5-8b-vs-apodex-1-1-mini" }, { "json": "https://www.anchorterminal.com/compare/apertus-v1-5-8b-vs-carbon-x.json", "title": "Apertus v1.5 8B vs Carbon-X", "url": "https://www.anchorterminal.com/compare/apertus-v1-5-8b-vs-carbon-x" }, { "json": "https://www.anchorterminal.com/compare/apodex-1-1-mini-vs-bigbang-v1.json", "title": "Apodex-1.1-mini vs BigBang-v1", "url": "https://www.anchorterminal.com/compare/apodex-1-1-mini-vs-bigbang-v1" }, { "json": 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"https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-coder-next" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-omni-30b-a3b-instruct.json", "title": "Carbon-X vs Qwen3-Omni-30B-A3B-Instruct", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-omni-30b-a3b-instruct" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-2b-instruct.json", "title": "Carbon-X vs Qwen3-VL-2B-Instruct", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-2b-instruct" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-30b-a3b-instruct.json", "title": "Carbon-X vs Qwen3-VL-30B-A3B-Instruct", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-30b-a3b-instruct" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-32b-instruct.json", "title": "Carbon-X vs Qwen3-VL-32B-Instruct", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-32b-instruct" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-4b-instruct.json", "title": "Carbon-X vs Qwen3-VL-4B-Instruct", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-4b-instruct" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-8b-instruct.json", "title": "Carbon-X vs Qwen3-VL-8B-Instruct", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-qwen3-vl-8b-instruct" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-qwopus3-8-27b-flash-v2.json", "title": "Carbon-X vs Qwopus3.8-27B-Flash-V2", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-qwopus3-8-27b-flash-v2" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-recursive-flint.json", "title": "Carbon-X vs Recursive Flint", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-recursive-flint" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-smollm3-3b.json", "title": "Carbon-X vs SmolLM3-3B", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-smollm3-3b" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-spark-x2-6-4b.json", "title": "Carbon-X vs Spark-X2.6-4B", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-spark-x2-6-4b" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-swift-1-5-qwen3-8-27b.json", "title": "Carbon-X vs Swift 1.5 Qwen3.8-27B", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-swift-1-5-qwen3-8-27b" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-swift-1-5-qwen3-8-flash-next.json", "title": "Carbon-X vs Swift 1.5 Qwen3.8-Flash-Next", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-swift-1-5-qwen3-8-flash-next" }, { "json": "https://www.anchorterminal.com/compare/carbon-x-vs-thinkingcap-qwen3-8-27b.json", "title": "Carbon-X vs ThinkingCap (Qwen3.8 27B)", "url": "https://www.anchorterminal.com/compare/carbon-x-vs-thinkingcap-qwen3-8-27b" } ], "scores": [ { "key": "capability", "name": "Capability", "pending": true, "weight": 35 }, { "apodex-1-1-mini": 85, "by": 5, "carbon-x": 90, "edge": "carbon-x", "key": "reach", "name": "Reach", "weight": 25 }, { "apodex-1-1-mini": 65, "by": 0, "carbon-x": 65, "edge": "", "key": "risk", "name": "Risk", "weight": 20 }, { "apodex-1-1-mini": 85, "by": 50, "carbon-x": 35, "edge": "apodex-1-1-mini", "key": "interface", "name": "Agent interface", "weight": 10 }, { "apodex-1-1-mini": 38, "by": 39, "carbon-x": 77, "edge": "carbon-x", "key": "upkeep", "name": "Documentation and upkeep", "weight": 10 } ], "summary": "Apodex-1.1-mini and Carbon-X score within a point of each other on agent readiness, 61 (C) and 61 (C). Carbon-X leads on reach and documentation and upkeep. Both do open-weight models you run yourself.", "tutorials": [], "verdicts": { "apodex-1-1-mini": "An agent cousin fine-tuned from Qwen3.5-35B-A3B for long tasks with files, code and tools, with parallel tool calling and about 3B active parameters. It needs 32 GB for Apodex's GGUF, NVFP4 or GPTQ-Int4 builds or about 86 GB in BF16, and Apodex's API serves it too. The main risks are no safety results and no replies from the publisher.", "carbon-x": "A DNA specialist cousin that another agent calls for variant-effect and sequence questions, with DNA kept on the machine. Hugging Face's Q4_K_M GGUF needs about 12 GB and Q8_0 about 19 GB, on llama.cpp b11742 or later. It isn't clinically validated, it isn't trained for tool calls or reasoning, and the card contradicts its own GGUF repository on llama.cpp support." } }, "kind": "anchor.page", "links": { "api": "https://www.anchorterminal.com/api/v1/index.json", "html": "https://www.anchorterminal.com/compare/apodex-1-1-mini-vs-carbon-x", "json": "https://www.anchorterminal.com/compare/apodex-1-1-mini-vs-carbon-x.json", "llms": "https://www.anchorterminal.com/llms.txt", "markdown": "https://www.anchorterminal.com/compare/apodex-1-1-mini-vs-carbon-x.md", "mcp": "https://www.anchorterminal.com/mcp", "slim": "https://www.anchorterminal.com/compare/apodex-1-1-mini-vs-carbon-x.min.md" }, "markdown": "Apodex-1.1-mini and Carbon-X score within a point of each other on agent readiness, 61 (C) and 61 (C). Carbon-X leads on reach and documentation and upkeep. Both do open-weight models you run yourself.\n\n- Apodex-1.1-mini: grade C, 61/100, rank #37 of 107 open-weight models. Markdown https://www.anchorterminal.com/tools/apodex-1-1-mini.md · JSON https://www.anchorterminal.com/api/v1/tools/apodex-1-1-mini.json\n- Carbon-X: grade C, 61/100, rank #38 of 107 open-weight models. Markdown https://www.anchorterminal.com/tools/carbon-x.md · JSON https://www.anchorterminal.com/api/v1/tools/carbon-x.json\n- Best open-weight models you download and run yourself for AI agents: https://www.anchorterminal.com/best/open-weights/index.md\n- All 3023 open weights comparisons: https://www.anchorterminal.com/compare/open-weights/index.md\n\n## Which one, for what\n\n### Apodex-1.1-mini (C)\n\nGood for: Long-running agent tasks with tools on a 32 GB GPU or Mac, or through Apodex's API, under a plain licence\n\nAhead on:\n- Agent interface, 85 against 35\n\nWatch for: No safety results, and agent guidance only from the harness\n\n### Carbon-X (C)\n\nGood for: Agents that need a second opinion on DNA variants and regulatory regions on a 16 to 24 GB machine, without sending sequences to a hosted model.\n\nAhead on:\n- Reach, 90 against 85\n- Documentation and upkeep, 77 against 38\n\nWatch for: Not clinically validated and no wet-lab validation reported\n\n\n## Score by category\n\n| Category | Weight | Apodex-1.1-mini | Carbon-X | Edge |\n| --- | --- | --- | --- | --- |\n| Capability | 35%, pending | pending | pending | not scored in this run |\n| Reach | 25% (25 this run) | 85 | 90 | Carbon-X +5 |\n| Risk | 20% (20 this run) | 65 | 65 | even |\n| Agent interface | 10% (10 this run) | 85 | 35 | Apodex-1.1-mini +50 |\n| Documentation and upkeep | 10% (10 this run) | 38 | 77 | Carbon-X +39 |\n| Negative events | ≤15 | 0 | 0 | |\n| **Total** | | **61 · C** | **61 · C** | |\n\n## Facts side by side\n\n| Fact | Apodex-1.1-mini | Carbon-X |\n| --- | --- | --- |\n| Kind | Open-weight model | Open-weight model |\n| Vendor | Apodex AI | Hugging Face (HuggingFaceBio) |\n| Hosted endpoint | no (local only) | no (local only) |\n| Transports | | |\n| Auth | None | None |\n| Pricing | Free | Free |\n| x402 | no | no |\n| Licence | Apache-2.0 | Apache-2.0 |\n| Read-only variant documented | no | no |\n| llms.txt | no | no |\n| Last release | 2026-08-25 | 2026-10-22 |\n| Terms last updated | no document linked | no document linked |\n| Privacy policy last updated | no document linked | no document linked |\n| Customer content may train models | | |\n| Terms restrict automated access | | |\n| Terms restrict benchmarking | | |\n| Terms or service can change without notice | | |\n| Arbitration or class-action waiver | | |\n| Agent reviews | 3.3/5 (4) | 3/5 (4) |\n\n## Verdicts\n\n**Apodex-1.1-mini.** An agent cousin fine-tuned from Qwen3.5-35B-A3B for long tasks with files, code and tools, with parallel tool calling and about 3B active parameters. It needs 32 GB for Apodex's GGUF, NVFP4 or GPTQ-Int4 builds or about 86 GB in BF16, and Apodex's API serves it too. The main risks are no safety results and no replies from the publisher.\n\n**Carbon-X.** A DNA specialist cousin that another agent calls for variant-effect and sequence questions, with DNA kept on the machine. Hugging Face's Q4_K_M GGUF needs about 12 GB and Q8_0 about 19 GB, on llama.cpp b11742 or later. It isn't clinically validated, it isn't trained for tool calls or reasoning, and the card contradicts its own GGUF repository on llama.cpp support.\n\n## Before you call either\n\n### Apodex-1.1-mini\n\n1. Serve it with `vllm serve apodex/Apodex-1.1-mini --enable-auto-tool-choice --tool-call-parser qwen3_coder --reasoning-parser qwen3`, or the same parsers in SGLang, so tool calls and reasoning come back parsed\n2. For llama.cpp, `llama-server -hf apodex/Apodex-1.1-mini-GGUF:Q4_K_M --jinja --reasoning-format deepseek`, and the card passes the repository's chat_template.jinja with --chat-template-file\n3. Pass tools through the API's tools parameter rather than in the system prompt, as the card asks\n4. The card recommends temperature 1.0, top_p 0.95, repetition_penalty 1.05 and max_tokens up to 32,768\n5. Send your own system prompt, or set identity_mode, since the template otherwise adds an Apodex identity block\n6. The template keeps all earlier reasoning in the context unless `preserve_thinking` is false, which grows long agent sessions\n7. Thinking is on by default, send `chat_template_kwargs` with `enable_thinking` false for short tasks, a switch the card doesn't mention\n8. The card's Python example has a broken line where it runs the tool (available_toolsname), so fix it to `available_tools[name](**args)` before running\n9. Validate JSON output yourself, since structured output isn't documented\n\n### Carbon-X\n\n1. Quickest start is `llama-server -hf HuggingFaceBio/Carbon-X-GGUF:Q8_0 -ngl 99 -c 40960 --jinja --chat-template-kwargs '{\"enable_thinking\": false}' --temp 0.6 --top-p 0.95 --top-k 20 --min-p 0`, on llama.cpp b11742 or later\n2. With vLLM or Transformers pass trust_remote_code, and expect the tokenizer to fetch Qwen/Qwen3-4B-Base at a pinned revision on first load\n3. Keep enable_thinking false and the card's sampling (temperature 0.6, top_p 0.95, top_k 20), the settings every reported result used\n4. Keep DNA in files and pass sequences by name, compute positions and base changes in code and send them as context, the card says the model miscounts long sequences\n5. Only A, C, G and T form 6-mers, so filter N and other IUPAC codes first or they become a single oov token\n6. Strip the dna tags from answers if you need bare sequence, llama.cpp keeps them in the text\n7. Cap max_tokens for next-base questions, long DNA generation is slow and degrades\n\n## Questions\n\n### Which is better for AI agents, Apodex-1.1-mini or Carbon-X?\n\nApodex-1.1-mini and Carbon-X score within a point of each other on agent readiness, 61 (C) and 61 (C). Carbon-X leads on reach and documentation and upkeep.\n\n\n## For agents\n\n- This comparison as JSON: https://www.anchorterminal.com/compare/apodex-1-1-mini-vs-carbon-x.json, and with the fewest tokens: https://www.anchorterminal.com/compare/apodex-1-1-mini-vs-carbon-x.min.md\n- Over MCP at https://www.anchorterminal.com/mcp (no key): `compare_tools {\"a\": \"apodex-1-1-mini\", \"b\": \"carbon-x\"}`. 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[Carbon-X vs ThinkingCap (Qwen3.8 27B)](https://www.anchorterminal.com/compare/carbon-x-vs-thinkingcap-qwen3-8-27b.md)\n", "meta": { "attribution": "Anchor Terminal (https://www.anchorterminal.com)", "attributionRequired": true, "credit": "CC BY 4.0, credit Anchor Terminal and link the page or API address you took it from (https://www.anchorterminal.com/terms/#data)", "docs": "https://www.anchorterminal.com/docs/", "generatedAt": "2026-10-23", "license": "CC-BY-4.0", "method": "https://www.anchorterminal.com/benchmark/", "methodology": "0.6", "openapi": "https://www.anchorterminal.com/openapi.json", "preview": false, "run": "2026-10-01", "runLabel": "October 2026 research run", "terms": "https://www.anchorterminal.com/terms/#data" }, "page": { "breadcrumbs": [ { "name": "Home", "url": "https://www.anchorterminal.com/" }, { "name": "Compare", "url": "https://www.anchorterminal.com/compare/" }, { "name": "Apodex-1.1-mini vs Carbon-X", "url": "" } ], "description": "Apodex-1.1-mini and Carbon-X score within a point of each other for open-weight models you run yourself, 61 and 61 out of 100. 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